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History for notebooks / efo / fetch_efo_ontology_from_pubmed.py
2020-01-12
e881bf3
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fix how headers is made for imcomplete data file
Morteza Ansarinia committed on 12 Jan 2020
619c0fe
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comment
Morteza Ansarinia committed on 12 Jan 2020
d0e4c7f
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cleanup
Morteza Ansarinia committed on 12 Jan 2020
b357b76
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add new pubmed csv generator (v2) that supports several queries
Morteza Ansarinia committed on 12 Jan 2020
cab671d
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a query builder and a smart code to fetch only unfetched queries from pubmed
Morteza Ansarinia committed on 12 Jan 2020
039b760
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query all rdfs:labels for efo, and generate a csv with pubmed results
Morteza Ansarinia committed on 12 Jan 2020
2020-01-09
d7d285f
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a new script to query concepts and tasks from EFO ontology and then count pubmed papers for the combinations
Morteza Ansarinia committed on 9 Jan 2020